Search results for "Pathology and Laboratory Medicine"

showing 10 items of 205 documents

Long-Distance Travellers: Phylogeography of a Generalist Parasite, Pholeter gastrophilus, from Cetaceans

2017

We studied the phylogeography and historical demography of the most generalist digenean from cetaceans, Pholeter gastrophilus, exploring the effects of isolation by distance, ecological barriers and hosts' dispersal ability on the population structure of this parasite. The ITS2 rDNA, and the mitochondrial COI and ND1 from 68 individual parasites were analysed. Worms were collected from seven oceanic and coastal cetacean species from the south western Atlantic (SWA), central eastern Atlantic, north eastern Atlantic (NEA), and Mediterranean Sea. Pholeter gastrophilus was considered a single lineage because reciprocal monophyly was not detected in the ML cladogram of all individuals, and seque…

0106 biological sciences0301 basic medicineHeredityTroglotrematidaePopulation Dynamicslcsh:MedicinePopulation geneticsMarine and Aquatic SciencesPathogenesisGeneralist and specialist speciesPathology and Laboratory Medicine01 natural sciencesMonophylyDatabase and Informatics MethodsOceansMedicine and Health Scienceslcsh:ScienceAtlantic OceanMammalseducation.field_of_studyLikelihood FunctionsMultidisciplinaryGeographyReproductive isolationDNA HelminthPhylogeographyGenetic MappingBiogeographyVertebratesHost-Pathogen InteractionsSequence AnalysisResearch ArticleReproductive IsolationBioinformaticsGenetic SpeciationDolphinsPopulationZoologyMarine BiologyBiologyResearch and Analysis Methods010603 evolutionary biology03 medical and health sciencesBodies of waterGeneticsMediterranean SeaAnimalseducationMarine MammalsIsolation by distanceDemographyEvolutionary BiologyAnalysis of VariancePopulation BiologyPilot Whaleslcsh:REcology and Environmental SciencesOrganismsWhalesBiology and Life SciencesGenetic VariationSequence Analysis DNAPhylogeography030104 developmental biologyHaplotypesAmniotesEarth SciencesBiological dispersallcsh:QCetaceaPopulation GeneticsPLoS ONE
researchProduct

Co-infection with iflaviruses influences the insecticidal properties of Spodoptera exigua multiple nucleopolyhedrovirus occlusion bodies: Implication…

2017

Biological insecticides based on Spodoptera exigua multiple nucleopolyhedrovirus (SeMNPV) can efficiently control S. exigua larvae on field and greenhouse crops in many parts of the world. Spanish wild populations and laboratory colonies of S. exigua are infected by two iflaviruses (SeIV-1 and SeIV-2). Here we evaluated the effect of iflavirus co-infection on the insecticidal characteristics of SeMNPV occlusion bodies (OBs). Overall, iflavirus co-inoculation consistently reduced median lethal concentrations (LC50) for SeMNPV OBs compared to larvae infected with SeMNPV alone. However, the speed of kill of SeMNPV was similar in the presence or absence of the iflaviruses. A reduction of the we…

0106 biological sciences0301 basic medicineLife CyclesInsecticidesPhysiologyBiosecuritySeMNPV occlusion bodieslcsh:MedicineInsectPathogenesisPathology and Laboratory MedicineWeight Gain01 natural sciencesIflavirus co-infectionLarvaeInvertebrate GenomicsMedicine and Health Scienceslcsh:Sciencemedia_commonLarvaMultidisciplinaryCoinfectionAgricultureGenomicsInsectsPhysiological ParametersAgrochemicalsResearch ArticleArthropodamedia_common.quotation_subjectBiologySpodopteraSpodopteraMicrobiologyLepidoptera genitalia03 medical and health sciencesExtraction techniquesExiguaGeneticsAnimalsPest Control BiologicalBiological InsecticidesInoculationlcsh:RfungiBody WeightOrganismsBiology and Life SciencesPesticidebiology.organism_classificationInvertebratesRNA extractionNucleopolyhedrovirusesResearch and analysis methods010602 entomology030104 developmental biologyBiological insecticidesAnimal Genomicslcsh:QDevelopmental BiologyPLoS ONE
researchProduct

Molecular signatures of silencing suppression degeneracy from a complex RNA virus

2021

As genomic architectures become more complex, they begin to accumulate degenerate and redundant elements. However, analyses of the molecular mechanisms underlying these genetic architecture features remain scarce, especially in compact but sufficiently complex genomes. In the present study, we followed a proteomic approach together with a computational network analysis to reveal molecular signatures of protein function degeneracy from a plant virus (as virus-host protein-protein interactions). We employed affinity purification coupled to mass spectrometry to detect several host factors interacting with two proteins of Citrus tristeza virus (p20 and p25) that are known to function as RNA sil…

0106 biological sciences0301 basic medicineProteomicsCitrusInteraction NetworksPathogenesisPlant Sciencemedicine.disease_causePathology and Laboratory Medicine01 natural sciencesInteractomeBiochemistryBimolecular fluorescence complementationRNA interferenceRNA silencing supressorsCitrus tristeza virusMedicine and Health SciencesDegeneracy (biology)Protein Interaction MapsBiology (General)H20 Plant diseasesPlant ProteinsEcologybiologyPlant virusesEukaryotaArgonautePlantsSmall interfering RNANucleic acidsRNA silencingComputational Theory and MathematicsGenetic interferenceExperimental Organism SystemsModeling and SimulationProteomeArgonaute ProteinsHost-Pathogen InteractionsRNA ViralEpigeneticsResearch ArticleClosterovirusRNA virusViral proteinQH301-705.5Arabidopsis ThalianaPlant PathogensComputational biologyGenome ViralBrassicaResearch and Analysis MethodsModels BiologicalPlant Viral Pathogens03 medical and health sciencesCellular and Molecular NeuroscienceViral ProteinsModel OrganismsPlant and Algal ModelsTobaccomedicineGeneticsGenomesNon-coding RNAProtein InteractionsMolecular signaturesMolecular BiologyEcology Evolution Behavior and SystematicsPlant DiseasesHost Microbial InteractionsBiology and life sciencesMass spectrometryOrganismsComputational BiologyProteinsRNA virusPlant Pathologybiology.organism_classificationGene regulationRepressor Proteins030104 developmental biologyU30 Research methodsAnimal StudiesRNAGene expression010606 plant biology & botanyF30 Plant genetics and breeding
researchProduct

Survey of five major grapevine viruses infecting Blatina and Žilavka cultivars in Bosnia and Herzegovina

2021

The sanitary status of grapevines has not yet been considered sufficiently in vineyards throughout Bosnia and Herzegovina (BiH). An extensive survey of five major grapevine viruses in the country was carried out in 2019. A total of 630 samples from the two dominant autochthonous cultivars, named Žilavka and Blatina, were tested by DAS-ELISA for the presence of grapevine leafroll-associated viruses (GLRaV-1 and 3), grapevine fleck virus (GFkV), grapevine fanleaf virus (GFLV) and Arabis mosaic virus (ArMV). Eighty-eight % of the samples were positive for at least one virus, and all five viruses were detected, thought with different incidence, i.e. GLRaV-3 (84%), GFLV (43%), GLRaV-1 (14%), GFk…

0106 biological sciences0301 basic medicineVeterinary medicineArtificial Gene Amplification and ExtensionDisease VectorsPathology and Laboratory MedicinePolymerase Chain Reaction01 natural sciencesPlant VirusesMedical ConditionsXiphinemaMedicine and Health SciencesVitisCultivarNematode InfectionsFlowering PlantsPhylogenyData Managementeducation.field_of_studyMultidisciplinarybiologyPhylogenetic treeQREukaryotaPhylogenetic AnalysisGrapevine fanleaf virusPlantsPhylogeneticsInfectious DiseasesMedical MicrobiologyViral PathogensVirusesMedicineRNA ViralGrapevineViral VectorsPathogensPlant ViruseResearch ArticleComputer and Information SciencesSciencePopulationPlant DiseaseResearch and Analysis Methodsno key wordsMicrobiologyVirusArabis mosaic virus03 medical and health sciencesVirologyParasitic DiseasesEvolutionary SystematicsMolecular Biology TechniqueseducationMolecular BiologyMicrobial PathogensTaxonomyPlant DiseasesBosnia and HerzegovinaEvolutionary BiologyGenetic diversityOrganismsBiology and Life SciencesSettore AGR/12 - Patologia VegetaleReverse Transcriptase-Polymerase Chain Reactionbiology.organism_classificationVector-Borne DiseasesSpecies Interactions030104 developmental biologyViral Transmission and Infection010606 plant biology & botany
researchProduct

To Swim or Not to Swim: Potential Transmission of Balaenophilus manatorum (Copepoda: Harpacticoida) in Marine Turtles

2017

Species of Balaenophilus are the only harpacticoid copepods that exhibit a widespread, obligate association with vertebrates, i.e., B. unisetus with whales and B. manatorum with marine turtles and manatees. In the western Mediterranean, juveniles of the loggerhead sea turtle, Caretta caretta are the only available hosts for B. manatorum, which has been found occurring at high prevalence (>80%) on them. A key question is how these epibionts are transmitted from host to host. We investigated this issue based on experiments with live specimens of B. manatorum that were cultured with turtle skin. Specimens were obtained from head-started hatchlings of C. caretta from the western Mediterranean. …

0106 biological sciencesAvian clutch sizePhysiologyOvipositionlcsh:MedicinePathogenesisPathology and Laboratory Medicine01 natural sciencesLoggerhead sea turtlelaw.inventionlawReproductive PhysiologyMedicine and Health SciencesBiomechanicsTurtle (robot)lcsh:ScienceHarpacticoidaMusculoskeletal SystemMultidisciplinarybiologyOrganic CompoundsPlanktonTurtlesCrustaceansChemistryVertebratesHost-Pathogen InteractionsPhysical SciencesLegsAnatomyClutchesResearch ArticleArthropoda010603 evolutionary biologyCopepodsHost-Parasite InteractionsCopepodaSea WaterAnimalsSymbiosisHatchlingSwimmingEthanolBiological Locomotion010604 marine biology & hydrobiologylcsh:RLimbs (Anatomy)Organic ChemistryOrganismsChemical CompoundsBiology and Life SciencesReptilesbiology.organism_classificationInvertebratesFisheryBaleenTestudinesAlcoholsAmniotesEarth SciencesBiological dispersallcsh:QHydrologyhuman activitiesPLoS ONE
researchProduct

Genome-Wide Estimation of the Spontaneous Mutation Rate of Human Adenovirus 5 by High-Fidelity Deep Sequencing

2016

Rates of spontaneous mutation determine the ability of viruses to evolve, infect new hosts, evade immunity and undergo drug resistance. Contrarily to RNA viruses, few mutation rate estimates have been obtained for DNA viruses, because their high replication fidelity implies that new mutations typically fall below the detection limits of Sanger and standard next-generation sequencing. Here, we have used a recently developed high-fidelity deep sequencing technique (Duplex Sequencing) to score spontaneous mutations in human adenovirus 5 under conditions of minimal selection. Based on >200 single-base spontaneous mutations detected throughout the entire viral genome, we infer an average mutatio…

0301 basic medicineAdenovirusesMutation rateGene Identification and AnalysisPathology and Laboratory MedicinePolymerase Chain ReactionMutation RateMedicine and Health Scienceslcsh:QH301-705.5GeneticsViral GenomicsInsertion MutationAdenovirus genomeMicrobial MutationHigh-Throughput Nucleotide SequencingGenomicsResistance mutation3. Good healthMedical MicrobiologyViral PathogensVirusesPathogensSequence AnalysisResearch Articlelcsh:Immunologic diseases. AllergySubstitution MutationImmunologyMicrobial GenomicsGenome ViralBiologyResearch and Analysis MethodsMicrobiologyDeep sequencingFrameshift mutation03 medical and health sciencesSequence Motif AnalysisVirologyGeneticsPoint MutationHumansMolecular Biology TechniquesSequencing TechniquesMicrobial PathogensMutation DetectionMolecular BiologySuppressor mutation030102 biochemistry & molecular biologyAdenoviruses HumanPoint mutationOrganismsBiology and Life SciencesVirology030104 developmental biologylcsh:Biology (General)MutationDynamic mutationParasitologyDNA viruseslcsh:RC581-607PLOS Pathogens
researchProduct

Candida blood stream infections observed between 2011 and 2016 in a large Italian University Hospital: A time-based retrospective analysis on epidemi…

2019

Candida bloodstream infection (BSI) represents a growing infective problem frequently associated to biofilm production due to the utilization of intravascular devices. Candida species distribution (n = 612 strains), their biofilm production and hospital antifungal drug consumption were evaluated in different wards of a tertiary care academic hospital in Italy during the years 2011–2016. In the considered time window, an increasing number of Candida BSI (p = 0.005) and of biofilm producing strains were observed (p<0.0001). Although C. albicans was the species more frequently isolated in BSI with a major biofilm production, an increased involvement of non-albicans species was reported, partic…

0301 basic medicineAntifungal AgentsTime FactorsAntifungal drugYeast and Fungal ModelsPathology and Laboratory Medicinelaw.inventionHospitals Universitychemistry.chemical_compound0302 clinical medicinelawAmphotericin BMedicine and Health Sciences030212 general & internal medicineAmphotericinFluconazoleCandidaFungal PathogensPrincipal Component AnalysisMultidisciplinaryAntimicrobialsQCandidiasisREukaryotaDrugsIntensive care unitHospitalsCorpus albicansIntensive Care UnitsExperimental Organism SystemsItalyMedical MicrobiologyEngineering and TechnologyMedicinePathogensResearch ArticleBiotechnologymedicine.drugCandida Candida bloodstream infection biofilm antifungal agents drug susceptibilityCathetersScience030106 microbiologyBioengineeringMycologyMicrobial Sensitivity TestsResearch and Analysis MethodsMicrobiologyMicrobiology03 medical and health sciencesMicrobial ControlmedicineCandida AlbicansHumansMicrobial PathogensRetrospective StudiesPharmacologyVoriconazoleAntifungalsbusiness.industryOrganismsFungiBiofilmBiology and Life SciencesYeastHealth CarechemistryHealth Care FacilitiesBiofilmsAnimal StudiesMedical Devices and EquipmentAntimicrobial ResistanceCaspofunginbusinessFluconazolePLOS ONE
researchProduct

Anticancer, antioxidant, and antibacterial activities of low molecular weight bioactive subfractions isolated from cultures of wood degrading fungus …

2017

The aim of this study is to investigate in vitro the anticancer, antioxidant, and antibacterial activities of three low molecular weight subfractions I, II and III isolated from secondary metabolites produced by the wood degrading fungus Cerrena unicolor. The present study demonstrated that the low molecular weight subfractions III exhibited the strongest inhibitory activity towards breast carcinoma cells MDA-MB-231, prostatic carcinoma cells PC3, and breast cancer cells MCF7 with the half-maximal inhibitory concentration (IC50) value of 52,25 μg/mL, 60,66 μg/mL, and 54,92 μg/mL, respectively. The highest percentage of inhibition was noted at a concentration of 300 μg/mL in all the examined…

0301 basic medicineAntioxidantStaphylococcusmedicine.medical_treatmentlcsh:MedicineBacillusLaccasesBacillus subtilisPathology and Laboratory Medicinemedicine.disease_causeBiochemistryAntioxidantsNeoplasmsMedicine and Health SciencesCerrena unicolorStaphylococcus AureusFood sciencelcsh:ScienceMultidisciplinarybiologyAntimicrobialsChemistryDrugsEukaryota04 agricultural and veterinary sciencesWood040401 food scienceAnti-Bacterial AgentsBacterial PathogensEnzymesChemistryBacillus SubtilisExperimental Organism SystemsMedical MicrobiologyStaphylococcus aureusPhysical SciencesMCF-7 CellsProkaryotic ModelsPathogensAntibacterial activityResearch ArticleAntineoplastic AgentsResearch and Analysis MethodsMicrobiology03 medical and health sciencesMinimum inhibitory concentration0404 agricultural biotechnologyPhenolsMicrobial ControlmedicineHumansMicrobial PathogensIC50PharmacologyBacterialcsh:RChemical CompoundsOrganismsFungiBiology and Life SciencesProteinsbiology.organism_classificationIn vitro030104 developmental biologyEnzymologyAntibacterialslcsh:QPolyporalesPLOS ONE
researchProduct

Secretion of autoimmune antibodies in the human subcutaneous adipose tissue

2018

The adipose tissue (AT) contributes to systemic and B cell intrinsic inflammation, reduced B cell responses and secretion of autoimmune antibodies. In this study we show that adipocytes in the human obese subcutaneous AT (SAT) secrete several pro-inflammatory cytokines and chemokines, which contribute to the establishment and maintenance of local and systemic inflammation, and consequent suboptimal immune responses in obese individuals, as we have previously shown. We also show that pro-inflammatory chemokines recruit immune cells expressing the corresponding receptors to the SAT, where they also contribute to local and systemic inflammation, secreting additional pro-inflammatory mediators.…

0301 basic medicineB CellsPhysiologylcsh:MedicineAutoimmunityPathology and Laboratory MedicineSystemic inflammationWhite Blood CellsAnimal CellsImmune PhysiologyPlasma cell differentiationAdipocytesMedicine and Health Scienceslcsh:ScienceImmune ResponseConnective Tissue CellsInnate Immune SystemMultidisciplinaryT CellsBody Fluids3. Good healthBloodmedicine.anatomical_structurePhysiological ParametersConnective TissueCytokinesChemokinesCellular TypesAnatomymedicine.symptomResearch ArticleLipolysisImmune CellsImmunologySubcutaneous FatInflammationBiology03 medical and health sciencesSigns and SymptomsImmune systemAntigenDiagnostic MedicinemedicineHumansObesityAntibody-Producing CellsB cellAutoantibodiesInflammationBlood CellsTumor Necrosis Factor-alphalcsh:RBody WeightAutoantibodyBiology and Life SciencesGerminal centerCell BiologyMolecular DevelopmentOxidative StressBiological Tissue030104 developmental biologyImmune SystemImmunologylcsh:QTranscription FactorsDevelopmental BiologyPLOS ONE
researchProduct

Spatial clustering of Borrelia burgdorferi sensu lato within populations of Allen's chipmunks and dusky-footed woodrats in northwestern California.

2017

The ecology of Lyme borreliosis is complex in northwestern California, with several potential reservoir hosts, tick vectors, and genospecies of Borrelia burgdorferi sensu lato. The primary objective of this study was to determine the fine-scale spatial distribution of different genospecies in four rodent species, the California ground squirrel (Otospermophilus beecheyi), northern flying squirrel (Glaucomys sabrinus), dusky-footed woodrat (Neotoma fuscipes), and Allen's chipmunk (Neotamias senex). Rodents were live-trapped between June 2004 and May 2005 at the Hoopa Valley Tribal Reservation (HVTR) in Humboldt County, California. Ear-punch biopsies obtained from each rodent were tested by po…

0301 basic medicineBacterial DiseasesChipmunkslcsh:MedicineForestsDisease VectorsPathology and Laboratory MedicineTrees0302 clinical medicineTicksMedicine and Health SciencesSquirrelslcsh:ScienceMammalsMultidisciplinarybiologyEcologyArvicolinaeSciuridaeEukaryotaPlantsTerrestrial EnvironmentsBacterial PathogensInfectious DiseasesMedical MicrobiologyVertebratesPathogensNeotamiasNorthern flying squirrelResearch ArticleBorrelia BurgdorferiArthropoda030231 tropical medicine030106 microbiologyZoologyTickMicrobiologyRodentsHost SpecificityEcosystems03 medical and health sciencesSensubiology.animalparasitic diseasesArachnidaAnimalsBorrelia burgdorferiMicrobial PathogensEcosystemSpatial AnalysisBacteriaIxodesBorrelialcsh:REcology and Environmental SciencesOrganismsBiology and Life Sciences15. Life on landbiology.organism_classificationbacterial infections and mycosesNeotoma fuscipesInvertebratesBorrelia InfectionChipmunkSpecies InteractionsCalifornia ground squirrelAmnioteslcsh:QPloS one
researchProduct